My app need the multiple app permission. I need to check how my app behaves by allowing or denying the different permission. Is there any way so that i can enable/disable the app permission from the appium to create the multiple scenario?
When your app starts, simply allow or disallow permission.
I’m not sure where you got stuck by the problem, so it’s hard to give you any advice. I hope you installed Appium and all dependencies and got the test project run successfully. For anything else, please be more specific. 
You can use adb commands to grand and revoke any permission.
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Thanks for the link.